Information for 22-WTTAMCTCTT (Motif 39)

C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G C T G A A C T G A C T G A G C T C T G A C G T A C G T A
p-value:1e-4
log p-value:-1.009e+01
Information Content per bp:1.828
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif84.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets50.2 +/- 31.4bp
Average Position of motif in Background51.1 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:WTTAMCTCTT
-TGACCYCT-
 C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----WTTAMCTCTT---
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---WTTAMCTCTT---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WTTAMCTCTT
-TGACCTYA-
 C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WTTAMCTCTT
CNNTTGACCTTTG
 A C G T A C G T A C G T C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:WTTAMCTCTT--
--AASCACTCAA
 C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:WTTAMCTCTT---
---RSCACTYRAG
 C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WTTAMCTCTT---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----WTTAMCTCTT---
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WTTAMCTCTT---
-TGACCTTTNCNT
 C G A T A C G T G A C T C T G A G T A C A G T C A G C T A G T C A C G T A G C T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T