Information for 21-GMCGCTMAKG (Motif 37)

C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
Reverse Opposite:
G T A C G T A C A C G T A C T G C G T A A C T G A G T C C T A G A C T G A G T C
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.779
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 16.2bp
Average Position of motif in Background38.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GMCGCTMAKG
AGCCACTCAAG
 A C G T C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GMCGCTMAKG
RGGGCACTAACY
 A C G T A C G T C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GMCGCTMAKG
--NGCTN---
 C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GMCGCTMAKG--
----CTAATKGV
 C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GMCGCTMAKG------
CACCGCTAATTAGCGGT
 A C G T C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GMCGCTMAKG
AASCACTCAA-
 A C G T C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GMCGCTMAKG------
CACCGCTAATTAGNNGN
 A C G T C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GMCGCTMAKG
--CACTAATT
 C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GMCGCTMAKG
RSCACTYRAG
 C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GMCGCTMAKG---
---NNTAATTANN
 C T A G G T A C A G T C C T A G G T A C A C G T T G A C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T