p-value: | 1e-17 |
log p-value: | -4.043e+01 |
Information Content per bp: | 1.678 |
Number of Target Sequences with motif | 72.0 |
Percentage of Target Sequences with motif | 10.73% |
Number of Background Sequences with motif | 1496.6 |
Percentage of Background Sequences with motif | 3.25% |
Average Position of motif in Targets | 49.8 +/- 25.4bp |
Average Position of motif in Background | 50.5 +/- 30.8bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACAGCAGGK-- CACAGCAGGGGG |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 2 |
Score: | 0.88 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGK-- CCACACAGCAGGAGA |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.88 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGK-- CCACACAGCAGGAGA |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 4 |
Score: | 0.87 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CACAGCAGGK-- GAGCACAGCAGGACA |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 5 |
Score: | 0.87 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGK---- DCHCAGCAGGRGGCC |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 6 |
Score: | 0.85 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACAGCAGGK DCTCAGCAGG- |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 7 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CACAGCAGGK-- ATGCAACAGGTGG |
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SCRT1/MA0743.1/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CACAGCAGGK---- GAGCAACAGGTGGTT |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 9 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CACAGCAGGK---- CACAGCGGGGGGTC |
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MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer
Match Rank: | 10 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CACAGCAGGK TGAGTCAGCA--- |
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