Information for 14-CTTHATCYCC (Motif 27)

G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C
Reverse Opposite:
C A T G T A C G C T G A C T A G C T G A A C G T C G T A T G C A C G T A C A T G
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.480
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif7.45%
Number of Background Sequences with motif1318.4
Percentage of Background Sequences with motif2.87%
Average Position of motif in Targets42.3 +/- 31.3bp
Average Position of motif in Background48.8 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0122.1_Obox2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTHATCYCC----
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTTHATCYCC----
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTTHATCYCC---
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTHATCYCC----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PB0012.1_Elf3_1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTTHATCYCC-----
--TTACTTCCTNGTN
 G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTTHATCYCC-
-----TCCCCA
 G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTHATCYCC---
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTHATCYCC---
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTHATCYCC----
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTHATCYCC---
NAATTTTATTACCTNN
 A C G T A C G T A C G T G T A C G C A T A C G T G C A T T G C A G A C T A G T C G A C T A T G C G T A C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A