Information for 11-GCCCRGCTCTATAAAG (Motif 26)

A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
Reverse Opposite:
T A G C A C G T A C G T G A C T C G T A A C G T T C G A T C A G C T G A A C T G A T G C A G T C C A T G T C A G C A T G A T G C
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.621
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets37.4 +/- 23.2bp
Average Position of motif in Background56.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCCRGCTCTATAAAG
----GNCTATAAAAGG
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCCRGCTCTATAAAG
----GGCTCYAKCAYC
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GCCCRGCTCTATAAAG
----NGCTN-------
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.48
Offset:7
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG---
-------TCTAAAAATAGA
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.47
Offset:6
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG--
------NGYCATAAAWCH
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG-------
--------GTATAAAAGGCGGGG
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG-------
--------GTATAAAAGGCGGGG
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG---
-------ACTATAAATAGA
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GCCCRGCTCTATAAAG
AGCTCGGCGCCAAAAGC
 A C G T A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.46
Offset:4
Orientation:forward strand
Alignment:GCCCRGCTCTATAAAG
----AGGTCTCTAACC
 A T C G G T A C A G T C G T A C C T A G A T C G T A G C G A C T A G T C A G C T G T C A G C A T C T G A T G C A T G C A A C T G
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C