Information for 10-TGCTKGGAWTTCTGTC (Motif 25)

A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C
Reverse Opposite:
A T C G T G C A A T G C C G T A A C T G G T C A C G T A G C T A A C G T A G T C A G T C G T A C T C G A A C T G G T A C C G T A
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.713
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.8 +/- 21.8bp
Average Position of motif in Background58.9 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC
TGCTGTGATTT-----
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TGCTKGGAWTTCTGTC--
--CTTGGCANNNTGCCAA
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC--
----------GCTGTCAA
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC--
-----------NTGTCAN
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:TGCTKGGAWTTCTGTC--
--------GGTCTGGCAT
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC--
----------CCTGTCAA
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC----
--------TGTCTGDCACCT
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC-
---TTGGCATGGTGCCA
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T
A C G T A C G T A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCTKGGAWTTCTGTC---
--CCNNACCATCTGGCCTN
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:10
Orientation:forward strand
Alignment:TGCTKGGAWTTCTGTC
----------GCTGTG
 A C G T C A T G G T A C A C G T C A T G C T A G A C T G T C G A C G A T G A C T A C G T A G T C A C G T A T C G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G