Information for 17-ACTTAAGCCATTG (Motif 24)

C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
Reverse Opposite:
G A T C T G C A G T C A C A G T A C T G T A C G A T G C A G C T A C G T C G T A C T G A C T A G G C A T
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.674
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif248.0
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets53.9 +/- 21.3bp
Average Position of motif in Background52.3 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACTTAAGCCATTG
--TTAATCCC---
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACTTAAGCCATTG
-CTTAATCCC---
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ACTTAAGCCATTG
---TAATCCCN--
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACTTAAGCCATTG
-NYTAATCCYB--
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTTAAGCCATTG
--ATAATCCC---
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACTTAAGCCATTG
-GCTAATCC----
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACTTAAGCCATTG-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTTAAGCCATTG
--TTAATCCT---
 C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTTAAGCCATTG
ACCACTTAA-------
 A C G T A C G T A C G T C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAAGCCATTG
CTTAACCACTTAAGGAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G C T C G A T G T C A C T G A A T C G A T G C G T A C G C T A A C G T A C G T C A T G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T A C G T A C G T A C G T