Information for 6-CCAGATCAGKYGACAA (Motif 16)

A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A
Reverse Opposite:
A C G T A C G T A T C G C G A T A G T C C T G A G T A C G A T C G C A T A C T G G T C A A C G T A G T C C G A T A C T G T C A G
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.693
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.5 +/- 32.4bp
Average Position of motif in Background64.5 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCAGATCAGKYGACAA-
--AGATGKDGAGATAAG
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T
A C G T A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA---
---------RNAACAATGG
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CCAGATCAGKYGACAA-
--------GTAAACAAT
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA----
-----------GACAATGNN
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.55
Offset:11
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA-
-----------AACAAT
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.53
Offset:11
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA---
-----------RACAAWGG
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.53
Offset:12
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA--
------------ACAAAG
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CCAGATCAGKYGACAA------
-----TCACGGAACAATAGGTG
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CCAGATCAGKYGACAA
--------RHTGWCAR
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCAGATCAGKYGACAA
-CAGATAAGGN-----
 A G T C G T A C C G T A T C A G C G T A A C G T T G A C C G T A C T A G C A T G G A C T T C A G C G T A A T G C C G T A C G T A
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T A C G T