Information for 9-CATTACAAATGTC (Motif 11)

A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
Reverse Opposite:
A C T G C G T A A T G C C G T A A C G T A C G T A C G T A C T G A C G T C T G A C G T A A C G T A C T G
p-value:1e-11
log p-value:-2.595e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.2 +/- 19.7bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATTACAAATGTC
ACCGTGACTAATTNN
 A C G T A C G T A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CATTACAAATGTC
---AACATATGTC
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATTACAAATGTC-
--TGACAGCTGTCA
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C A C G T
A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CATTACAAATGTC
CCGTATTATAAACAA-
 A C G T A C G T A C G T A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATTACAAATGTC
ACATTCCA------
 A C G T A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATTACAAATGTC-
--TGACACCTGTCA
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C A C G T
A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CATTACAAATGTC-
--TGACAGGTGTCA
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C A C G T
A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

TGIF1/MA0796.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CATTACAAATGTC-
--TGACAGCTGTCA
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C A C G T
A C G T A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CATTACAAATGTC
---ACCATATGTT
 A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CATTACAAATGTC
ATTTGCATAACAAAG---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G C T G T C A A G T C G T C A C G T A C G T A C G A T A T C G A C G T A G T C
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G A C G T A C G T A C G T