p-value: | 1e-9 |
log p-value: | -2.090e+01 |
Information Content per bp: | 1.763 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.40% |
Number of Background Sequences with motif | 56.4 |
Percentage of Background Sequences with motif | 0.12% |
Average Position of motif in Targets | 37.8 +/- 22.0bp |
Average Position of motif in Background | 46.9 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CCAGMARGGGGGC CACAGCAGGGGG-- |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGMARGGGGGC DCHCAGCAGGRGGCC |
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ZIC1/MA0696.1/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAGMARGGGGGC CACAGCGGGGGGTC |
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ZIC3/MA0697.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGMARGGGGGC NCGCAGCGGGGGGTC |
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ZIC4/MA0751.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGMARGGGGGC NCNCAGCGGGGGGTC |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCAGMARGGGGGC CCACACAGCAGGAGA-- |
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NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CCAGMARGGGGGC AACAGATGGC---- |
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PB0076.1_Sp4_1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCAGMARGGGGGC------ --NNNAAGGGGGCGGGNNN |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCAGMARGGGGGC DCTCAGCAGG----- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CCAGMARGGGGGC CCACACAGCAGGAGA-- |
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