Information for 5-CCAMTGGGSRCRMMCT (Motif 3)

A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
Reverse Opposite:
C G T A A C T G C A G T A C T G A G T C A C T G A G T C A T G C A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.1 +/- 16.0bp
Average Position of motif in Background37.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCAMTGGGSRCRMMCT
TCCCCTGGGGAC-----
 A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAMTGGGSRCRMMCT
AGCCAATCGG--------
 A C G T A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCAMTGGGSRCRMMCT
NNNATTGGGGGTNTCCT
 A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCAMTGGGSRCRMMCT
NNTNNACAATGGGANNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAMTGGGSRCRMMCT
NNNNTTGGGCACNNCN-
 A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCAMTGGGSRCRMMCT
TCACCTCTGGGCAG-----
 A C G T A C G T A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.52
Offset:-7
Orientation:forward strand
Alignment:-------CCAMTGGGSRCRMMCT
AAATGGACCAATCAG--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCAMTGGGSRCRMMCT-
-NNNGGGGCGCCCCCNN
 A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCAMTGGGSRCRMMCT---
----ANCGCGCGCCCTTNN
 A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CCAMTGGGSRCRMMCT
ACTAGCCAATCA---------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A G T A C A C G T C T A G A C T G T A C G A T C G C T A G A G T C T C A G G T A C G T A C A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T