Information for 7-GCCCTAATCC (Motif 7)

A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G C T C T G A C T A G A C T G A T C G T G A C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.861
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets41.5 +/- 20.7bp
Average Position of motif in Background45.4 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCCCTAATCC--
--GCTAATCCCC
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCCCTAATCC
--GCTAATCC
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCCCTAATCC--
--CCTAATCCGC
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:forward strand
Alignment:GCCCTAATCC-
--CTTAATCCC
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:5
Score:0.80
Offset:2
Orientation:forward strand
Alignment:GCCCTAATCC--
--NYTAATCCYB
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.80
Offset:3
Orientation:forward strand
Alignment:GCCCTAATCC-
---TTAATCCC
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:GCCCTAATCC-
---YTAATCCY
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTAATCC------
NNNATTAATCCGNTTNA
 A C G T A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTAATCC------
NNNATTAATCCGNTTNA
 A C G T A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.79
Offset:3
Orientation:forward strand
Alignment:GCCCTAATCC-
---TTAATCCT
 A C T G A T G C A G T C A G T C A G C T C T G A C G T A C G A T A G T C A G T C A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T