Information for 6-CGCATGCGCA (Motif 6)

T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
Reverse Opposite:
G A C T T C A G G T A C T C A G A T G C G T C A A C G T T A C G G T A C A T C G
p-value:1e-12
log p-value:-2.950e+01
Information Content per bp:1.689
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif9.46%
Number of Background Sequences with motif745.6
Percentage of Background Sequences with motif1.62%
Average Position of motif in Targets54.3 +/- 24.2bp
Average Position of motif in Background48.1 +/- 37.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA
 A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC
 A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG
 A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCATGCGCA
NNCGCGTGNN--
 A C G T A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
ACGCCCACGCA
 A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA
SNGCACCTGCHS-
 A C G T A C G T A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

PB0095.1_Zfp161_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA---
TGGCGCGCGCGCCTGA
 A C G T A C G T A C G T T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
TGCGTG----
 T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGCATGCGCA--
---ATGCCCACC
 T A G C C A T G A T G C T G C A C A G T A T C G A G T C C A T G A G T C C T G A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C