Information for 2-ACTTTTTTSGCGC (Motif 3)

G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C
Reverse Opposite:
A T C G A G T C A T C G A G T C A T C G C G T A C G T A C T G A C G T A C G T A C T G A A C T G A C G T
p-value:1e-17
log p-value:-3.999e+01
Information Content per bp:1.776
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.70%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 25.9bp
Average Position of motif in Background64.5 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC---
----TTTTCGCGCGAA
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC-
----DTTTCCCGCC
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC-
TTTTTTTTCNNGTN
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACTTTTTTSGCGC--
---VDTTTCCCGCCA
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC----
-----TTTGGCGCCAAA
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC-
----NYTTCCCGCC
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC------
--NNNNTTGGCGCCGANNN
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F4/MA0470.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC--
----NNTTCCCGCCC
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC---
------TTCCCGCCWG
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTTTTTTSGCGC------
--NNNNTTGGCGCCGANNN
 G T C A T A G C G A C T A C G T C G A T A G C T A C G T A C G T A T G C C T A G A T G C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T