Information for 22-CTTTAAGTAAACTTAG (Motif 24)

A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A C G T A A C T G
p-value:1e-2
log p-value:-6.861e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTTAAGTAAACTTAG-
NTTTTAGTTAACNNAGN
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTTAAGTAAACTTAG
GGGTTTAATTAAAATTC-
 A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTTTAAGTAAACTTAG-
NNNTTAGTTAACTNANN
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG
---AAAGTAAACA---
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG
---AAAGTAAACA---
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG
---TAAGTAAACAAA-
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG--
-AAAAAGTAAACAAAGAC
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

NFIL3/MA0025.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG
--TTATGTAACAT---
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTTAAGTAAACTTAG
---TATGTAAATAT--
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTTAAGTAAACTTAG-
--CAAAGTAAACANNNN
 A G T C A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C T G A C G T
A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A