Information for 16-GCTCTTSMKGCTGCTC (Motif 20)

A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
Reverse Opposite:
T A C G C G T A A C T G G T A C G C T A T A C G A G T C G T C A A C T G A T C G T C G A C G T A T A C G G T C A C T A G A T G C
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.617
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif11.63%
Number of Background Sequences with motif240.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets38.8 +/- 28.2bp
Average Position of motif in Background48.7 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTCTTSMKGCTGCTC-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTTSMKGCTGCTC--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCTTSMKGCTGCTC
NGCTN------------
 A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:GCTCTTSMKGCTGCTC----
-----AGATGCTRCTRCCHT
 A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GCTCTTSMKGCTGCTC---
AGATSTNDNNDSAGATAASN
 A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C A C G T A C G T A C G T
C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.45
Offset:-2
Orientation:reverse strand
Alignment:--GCTCTTSMKGCTGCTC
NGGATTAN----------
 A C G T A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:GCTCTTSMKGCTGCTC
-CTGTTCCTGG-----
 A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.44
Offset:0
Orientation:reverse strand
Alignment:GCTCTTSMKGCTGCTC
DCTCAGCAGG------
 A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.44
Offset:0
Orientation:forward strand
Alignment:GCTCTTSMKGCTGCTC
GCTCCG----------
 A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:10
Score:0.43
Offset:-6
Orientation:forward strand
Alignment:------GCTCTTSMKGCTGCTC
AAACYKGTTWDACMRGTTTB--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C A C G T A G T C G A C T A C G T A T G C G T A C A C G T A C T G A G T C C G A T C A T G T A G C C G A T A G T C
C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T A C G T A C G T