Information for 2-AVCTVGGCTCAAGTGA (Motif 2)

G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A
Reverse Opposite:
G A C T A G T C C G T A A T G C C G A T C G A T C T A G C G T A C T A G G A T C G T A C A G C T C T G A A C T G A C T G C G A T
p-value:1e-10
log p-value:-2.522e+01
Information Content per bp:1.737
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif9.30%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 26.7bp
Average Position of motif in Background32.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AVCTVGGCTCAAGTGA
----CCGGTCACGTGA
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A
A C G T A C G T A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA-
-----BRGTCACGTGAC
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AVCTVGGCTCAAGTGA
CTCCAGGGGTCAATTGA
 A C G T G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AVCTVGGCTCAAGTGA
--CAAAGGTCAAGGG-
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA----
---NANTTTCAAGTGGTTAN
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA
-------NTCAAGTGG
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

TFEC/MA0871.1/Jaspar

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA-
-------NTCACGTGAT
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AVCTVGGCTCAAGTGA-
-------RTCATGTGAC
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA-
-------NTCAAGTGGN
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AVCTVGGCTCAAGTGA----
----AANTTCAAGTGGCTTN
 G C T A T G A C G T A C A G C T T C G A A C T G C A T G G A T C C G A T A G T C C G T A G C T A A T C G G C A T C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A