Information for 15-AGAATGGTGTGAATGG (Motif 19)

C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
Reverse Opposite:
G T A C A T G C C G T A A C G T A C G T A G T C C G T A A G T C C G T A A G T C G T A C C G T A A C G T A C G T A G T C C G A T
p-value:1e-5
log p-value:-1.305e+01
Information Content per bp:1.934
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 4.2bp
Average Position of motif in Background52.1 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---AAGGTGTGAA---
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGAATGGTGTGAATGG
---ATGGGGTGAT---
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---AAGGTGTGAAA--
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---AAGGTGTKAA---
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGAATGGTGTGAATGG
GGAGAAAGGTGCGA----
 A C G T A C G T C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG-
GAAAAGGTGTGAAAATT
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---AAGGTGTGAAAAT
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---TAGGTGTGAAG--
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
---ATGGGGTGAT---
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGAATGGTGTGAATGG
----AGGTGTGAAA--
 C G T A A C T G C G T A C G T A A C G T A C T G C T A G A C G T A C T G A C G T A C T G C G T A C G T A G A C T A T C G A C T G
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T