Information for 8-HTTACCTCCAGAAATH (Motif 11)

G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
Reverse Opposite:
C A G T C G T A A C G T G A C T C G A T G T A C A C G T C A T G A T C G C G T A C T A G A C T G C G A T T G C A C G T A C T G A
p-value:1e-7
log p-value:-1.762e+01
Information Content per bp:1.743
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif6.98%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.7 +/- 30.2bp
Average Position of motif in Background14.9 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH-
-TGACCTNTAGTAACCC
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A A C G T
A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:HTTACCTCCAGAAATH----
-TGACCTAAAGTAACCTCTG
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A A C G T A C G T A C G T A C G T
A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH
-TGACCTTGAT-----
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH
-TGACCTYA-------
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---HTTACCTCCAGAAATH
NNACTTACCTN--------
 A C G T A C G T A C G T G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH
-TGACCT---------
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH
-TGACCYCT-------
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:HTTACCTCCAGAAATH
ATGACCTTGA------
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:HTTACCTCCAGAAATH
NTGACCTTGA------
 G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-HTTACCTCCAGAAATH
TCTTATCT---------
 A C G T G A C T A C G T A C G T C G T A T G A C G A T C A C G T T A G C G T A C C G T A A C T G C G T A C T G A C G T A G C A T G C T A
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T