Information for 1-GCTCACGCCTGTA (Motif 1)

A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C T G C G T A A C T G A G T C
p-value:1e-17
log p-value:-3.933e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif11.63%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 8.9bp
Average Position of motif in Background75.7 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
--TCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
--TCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTCACGCCTGTA
NNGGCCACGCCTTTN
 A C G T A C G T A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
--TCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
--TCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
--TCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
---CACGCA----
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCTCACGCCTGTA
--CCTCACCTG--
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
-TTCACACCTT--
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTCACGCCTGTA
TTTCACACCT---
 A C T G A G T C A C G T A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C G T C G T A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T