Information for 5-CAGCAGGGGC (Motif 8)

G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
Reverse Opposite:
T A C G A G T C A G T C A G T C A G T C C G A T A C T G G T A C C G A T C T A G
p-value:1e-11
log p-value:-2.754e+01
Information Content per bp:1.766
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.68%
Number of Background Sequences with motif987.6
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets48.7 +/- 22.2bp
Average Position of motif in Background47.7 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGGGGC
CACAGCAGGGGG
 A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGGGC--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAGGGGC--
CACAGCGGGGGGTC
 A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGGGC--
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CAGCAGGGGC--
SDGCAGGTGCNS
 G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGGGC--
NCNCAGCGGGGGGTC
 A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGGGC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGGGGC
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAGGGGC
DCTCAGCAGG---
 A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGCAGGGGC
NAACAGCTGG---
 A C G T A C G T A C G T G A T C C G T A A C T G G T A C C G T A C T A G C T A G C T A G A C T G A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T