Information for 3-GCCCACTGGTGGT (Motif 6)

A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
Reverse Opposite:
C T G A G T A C A G T C C G T A A G T C A G T C C G T A A T C G C G A T A C T G A T C G A C T G G T A C
p-value:1e-12
log p-value:-2.826e+01
Information Content per bp:1.860
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 27.0bp
Average Position of motif in Background57.7 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----GCCCACTGGTGGT--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GCCCACTGGTGGT--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------GCCCACTGGTGGT
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCACTGGTGGT
NTGCCCANNGGTNA-
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCCCACTGGTGGT------
--NNANTGGTGGTCTTNNN
 A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCCACTGGTGGT
GCCATCTGTT---
 A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCCACTGGTGGT---
----NTCGGTGGTCGC
 A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCCACTGGTGGT
NTGCCCTTGGGCGN-
 A C G T A C G T A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCCACTGGTGGT
---AACAGGTGNT
 A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCCACTGGTGGT
GCCAGCTGBTNB-
 A C T G A G T C A T G C G T A C C G T A A T G C A C G T C T A G A C T G C G A T A C T G A C T G A G C T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T