Information for 7-GGGAGGCCTTTGT (Motif 14)

T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T
Reverse Opposite:
G C T A A T G C G T C A T C G A C G T A C T A G A T C G A T G C A G T C A G C T A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.770
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif63.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.8 +/- 22.1bp
Average Position of motif in Background50.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGAGGCCTTTGT
-AGGVNCCTTTGT
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.67
Offset:6
Orientation:forward strand
Alignment:GGGAGGCCTTTGT-
------CCTTTGTT
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGGAGGCCTTTGT
---AGGCCTNG--
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGGAGGCCTTTGT-
------CCWTTGTY
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGAGGCCTTTGT
-CTAGGCCT----
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGGAGGCCTTTGT---
------CCTTTGTTTT
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GGGAGGCCTTTGT---
------CCWTTGTYYB
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGGAGGCCTTTGT--
-----NCCATTGTTC
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GGGAGGCCTTTGT---
------YCTTTGTTCC
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGAGGCCTTTGT------
--TNNTCCTTTGTTCTNNT
 T C A G C T A G C T A G C T G A C T A G A T C G A T G C A G T C G C A T A G C T C A G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T