Information for 5-AGCCTAATGGTAA (Motif 11)

C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T G T C A A T G C G T A C C G T A A G C T A C G T G C T A C T A G C T A G A G T C A C G T
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.3 +/- 7.5bp
Average Position of motif in Background36.2 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARX1/MA0875.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGCCTAATGGTAA
---NTAATTGN--
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGCCTAATGGTAA
---CTAATKGV--
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGCCTAATGGTAA----
-TCTCAAAGGTCACGAG
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCCTAATGGTAA--
RGSMTBCTGGGAAAT
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCCTAATGGTAA--
-----AATGGAAAAT
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGCCTAATGGTAA--
-----NATGGAAAAN
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCCTAATGGTAA
-ANGNAAAGGTCA
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCTAATGGTAA----
-TCTCAAAGGTCACCTG
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCCTAATGGTAA
---NTAATKGTTT
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCCTAATGGTAA
---CTAATCGNT-
 C G T A A C T G A G T C A G T C C A G T C G T A C T G A C G A T A C T G A T C G A C G T G T C A C G T A
A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T