Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-28 | -6.560e+01 | 0.0000 | 141.0 | 15.02% | 2475.0 | 5.18% | motif file (matrix) |
svg |
2 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-23 | -5.460e+01 | 0.0000 | 124.0 | 13.21% | 2249.2 | 4.71% | motif file (matrix) |
svg |
3 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-21 | -4.990e+01 | 0.0000 | 37.0 | 3.94% | 220.1 | 0.46% | motif file (matrix) |
svg |
4 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-20 | -4.726e+01 | 0.0000 | 19.0 | 2.02% | 35.1 | 0.07% | motif file (matrix) |
svg |
5 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-19 | -4.599e+01 | 0.0000 | 88.0 | 9.37% | 1414.5 | 2.96% | motif file (matrix) |
svg |
6 |
| E-box(bHLH)/Promoter/Homer | 1e-18 | -4.149e+01 | 0.0000 | 42.0 | 4.47% | 377.4 | 0.79% | motif file (matrix) |
svg |
7 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-13 | -3.001e+01 | 0.0000 | 48.0 | 5.11% | 678.9 | 1.42% | motif file (matrix) |
svg |
8 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-11 | -2.672e+01 | 0.0000 | 47.0 | 5.01% | 718.8 | 1.51% | motif file (matrix) |
svg |
9 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-11 | -2.584e+01 | 0.0000 | 86.0 | 9.16% | 1943.6 | 4.07% | motif file (matrix) |
svg |
10 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-11 | -2.568e+01 | 0.0000 | 77.0 | 8.20% | 1649.1 | 3.45% | motif file (matrix) |
svg |
11 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-10 | -2.500e+01 | 0.0000 | 58.0 | 6.18% | 1074.0 | 2.25% | motif file (matrix) |
svg |
12 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.498e+01 | 0.0000 | 56.0 | 5.96% | 1014.5 | 2.12% | motif file (matrix) |
svg |
13 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.358e+01 | 0.0000 | 90.0 | 9.58% | 2173.5 | 4.55% | motif file (matrix) |
svg |
14 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-9 | -2.249e+01 | 0.0000 | 82.0 | 8.73% | 1940.5 | 4.06% | motif file (matrix) |
svg |
15 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-9 | -2.143e+01 | 0.0000 | 62.0 | 6.60% | 1309.0 | 2.74% | motif file (matrix) |
svg |
16 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-8 | -2.038e+01 | 0.0000 | 80.0 | 8.52% | 1961.8 | 4.11% | motif file (matrix) |
svg |
17 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-8 | -2.037e+01 | 0.0000 | 66.0 | 7.03% | 1479.4 | 3.10% | motif file (matrix) |
svg |
18 |
| CRE(bZIP)/Promoter/Homer | 1e-8 | -2.012e+01 | 0.0000 | 45.0 | 4.79% | 821.9 | 1.72% | motif file (matrix) |
svg |
19 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-8 | -1.957e+01 | 0.0000 | 181.0 | 19.28% | 5989.6 | 12.54% | motif file (matrix) |
svg |
20 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-8 | -1.892e+01 | 0.0000 | 98.0 | 10.44% | 2692.0 | 5.64% | motif file (matrix) |
svg |
21 |
| Sp1(Zf)/Promoter/Homer | 1e-8 | -1.868e+01 | 0.0000 | 103.0 | 10.97% | 2895.1 | 6.06% | motif file (matrix) |
svg |
22 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-7 | -1.730e+01 | 0.0000 | 62.0 | 6.60% | 1466.5 | 3.07% | motif file (matrix) |
svg |
23 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-7 | -1.678e+01 | 0.0000 | 19.0 | 2.02% | 205.3 | 0.43% | motif file (matrix) |
svg |
24 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.663e+01 | 0.0000 | 46.0 | 4.90% | 958.2 | 2.01% | motif file (matrix) |
svg |
25 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-7 | -1.639e+01 | 0.0000 | 17.0 | 1.81% | 168.9 | 0.35% | motif file (matrix) |
svg |
26 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-6 | -1.576e+01 | 0.0000 | 191.0 | 20.34% | 6756.3 | 14.15% | motif file (matrix) |
svg |
27 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-6 | -1.531e+01 | 0.0000 | 79.0 | 8.41% | 2177.2 | 4.56% | motif file (matrix) |
svg |
28 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.378e+01 | 0.0000 | 92.0 | 9.80% | 2774.0 | 5.81% | motif file (matrix) |
svg |
29 |
| GFY(?)/Promoter/Homer | 1e-5 | -1.298e+01 | 0.0000 | 17.0 | 1.81% | 216.0 | 0.45% | motif file (matrix) |
svg |
30 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-5 | -1.287e+01 | 0.0000 | 92.0 | 9.80% | 2836.6 | 5.94% | motif file (matrix) |
svg |
31 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-5 | -1.244e+01 | 0.0000 | 93.0 | 9.90% | 2907.9 | 6.09% | motif file (matrix) |
svg |
32 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.243e+01 | 0.0000 | 89.0 | 9.48% | 2747.4 | 5.75% | motif file (matrix) |
svg |
33 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-5 | -1.241e+01 | 0.0000 | 42.0 | 4.47% | 983.6 | 2.06% | motif file (matrix) |
svg |
34 |
| ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer | 1e-5 | -1.196e+01 | 0.0001 | 34.0 | 3.62% | 733.9 | 1.54% | motif file (matrix) |
svg |
35 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-5 | -1.161e+01 | 0.0001 | 60.0 | 6.39% | 1671.8 | 3.50% | motif file (matrix) |
svg |
36 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-4 | -1.072e+01 | 0.0002 | 42.0 | 4.47% | 1057.9 | 2.22% | motif file (matrix) |
svg |
37 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -9.887e+00 | 0.0005 | 268.0 | 28.54% | 10993.8 | 23.02% | motif file (matrix) |
svg |
38 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-3 | -8.745e+00 | 0.0015 | 42.0 | 4.47% | 1158.9 | 2.43% | motif file (matrix) |
svg |
39 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.669e+00 | 0.0016 | 92.0 | 9.80% | 3180.2 | 6.66% | motif file (matrix) |
svg |
40 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.159e+00 | 0.0026 | 68.0 | 7.24% | 2223.5 | 4.66% | motif file (matrix) |
svg |
41 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.086e+00 | 0.0027 | 163.0 | 17.36% | 6384.4 | 13.37% | motif file (matrix) |
svg |
42 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.854e+00 | 0.0034 | 28.0 | 2.98% | 694.1 | 1.45% | motif file (matrix) |
svg |
43 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.800e+00 | 0.0035 | 92.0 | 9.80% | 3266.8 | 6.84% | motif file (matrix) |
svg |
44 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.610e+00 | 0.0041 | 48.0 | 5.11% | 1459.9 | 3.06% | motif file (matrix) |
svg |
45 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.252e+00 | 0.0057 | 49.0 | 5.22% | 1524.6 | 3.19% | motif file (matrix) |
svg |
46 |
| Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.175e+00 | 0.0061 | 15.0 | 1.60% | 288.8 | 0.60% | motif file (matrix) |
svg |
47 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.151e+00 | 0.0061 | 46.0 | 4.90% | 1412.4 | 2.96% | motif file (matrix) |
svg |
48 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-3 | -6.977e+00 | 0.0071 | 30.0 | 3.19% | 809.1 | 1.69% | motif file (matrix) |
svg |
49 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -6.859e+00 | 0.0078 | 23.0 | 2.45% | 563.3 | 1.18% | motif file (matrix) |
svg |
50 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -6.827e+00 | 0.0079 | 11.0 | 1.17% | 180.4 | 0.38% | motif file (matrix) |
svg |
51 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.693e+00 | 0.0088 | 102.0 | 10.86% | 3826.2 | 8.01% | motif file (matrix) |
svg |
52 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -6.530e+00 | 0.0102 | 97.0 | 10.33% | 3625.8 | 7.59% | motif file (matrix) |
svg |
53 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.484e+00 | 0.0105 | 76.0 | 8.09% | 2715.4 | 5.69% | motif file (matrix) |
svg |
54 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.457e+00 | 0.0106 | 39.0 | 4.15% | 1184.8 | 2.48% | motif file (matrix) |
svg |
55 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.428e+00 | 0.0107 | 187.0 | 19.91% | 7750.7 | 16.23% | motif file (matrix) |
svg |
56 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -6.348e+00 | 0.0114 | 79.0 | 8.41% | 2859.6 | 5.99% | motif file (matrix) |
svg |
57 |
| Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.303e+00 | 0.0117 | 12.0 | 1.28% | 222.4 | 0.47% | motif file (matrix) |
svg |
58 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.284e+00 | 0.0117 | 68.0 | 7.24% | 2393.9 | 5.01% | motif file (matrix) |
svg |
59 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.269e+00 | 0.0117 | 100.0 | 10.65% | 3790.2 | 7.94% | motif file (matrix) |
svg |
60 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.089e+00 | 0.0138 | 24.0 | 2.56% | 635.8 | 1.33% | motif file (matrix) |
svg |
61 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -6.047e+00 | 0.0141 | 101.0 | 10.76% | 3863.5 | 8.09% | motif file (matrix) |
svg |
62 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.011e+00 | 0.0144 | 24.0 | 2.56% | 639.5 | 1.34% | motif file (matrix) |
svg |
63 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.893e+00 | 0.0159 | 38.0 | 4.05% | 1184.5 | 2.48% | motif file (matrix) |
svg |
64 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-2 | -5.543e+00 | 0.0223 | 34.0 | 3.62% | 1050.8 | 2.20% | motif file (matrix) |
svg |
65 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -5.536e+00 | 0.0223 | 73.0 | 7.77% | 2689.2 | 5.63% | motif file (matrix) |
svg |
66 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-2 | -5.491e+00 | 0.0227 | 33.0 | 3.51% | 1014.2 | 2.12% | motif file (matrix) |
svg |
67 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-2 | -5.308e+00 | 0.0269 | 53.0 | 5.64% | 1852.8 | 3.88% | motif file (matrix) |
svg |
68 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.272e+00 | 0.0275 | 14.0 | 1.49% | 319.6 | 0.67% | motif file (matrix) |
svg |
69 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-2 | -5.139e+00 | 0.0309 | 61.0 | 6.50% | 2212.9 | 4.63% | motif file (matrix) |
svg |
70 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.074e+00 | 0.0325 | 31.0 | 3.30% | 964.9 | 2.02% | motif file (matrix) |
svg |
71 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -5.028e+00 | 0.0336 | 21.0 | 2.24% | 580.5 | 1.22% | motif file (matrix) |
svg |
72 |
| p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer | 1e-2 | -4.976e+00 | 0.0349 | 17.0 | 1.81% | 436.8 | 0.91% | motif file (matrix) |
svg |
73 |
| CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer | 1e-2 | -4.935e+00 | 0.0354 | 5.0 | 0.53% | 60.5 | 0.13% | motif file (matrix) |
svg |
74 |
| GFX(?)/Promoter/Homer | 1e-2 | -4.935e+00 | 0.0354 | 5.0 | 0.53% | 60.4 | 0.13% | motif file (matrix) |
svg |
75 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.890e+00 | 0.0365 | 67.0 | 7.14% | 2502.0 | 5.24% | motif file (matrix) |
svg |
76 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-2 | -4.842e+00 | 0.0378 | 54.0 | 5.75% | 1942.6 | 4.07% | motif file (matrix) |
svg |
77 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -4.773e+00 | 0.0400 | 107.0 | 11.40% | 4317.5 | 9.04% | motif file (matrix) |
svg |
78 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-2 | -4.647e+00 | 0.0448 | 8.0 | 0.85% | 147.8 | 0.31% | motif file (matrix) |
svg |