Information for 5-GGAGCTGTCC (Motif 6)

C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C
Reverse Opposite:
C T A G C T A G C G T A G A T C C G T A T C A G G T A C A C G T A G T C G A T C
p-value:1e-14
log p-value:-3.295e+01
Information Content per bp:1.848
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif507.4
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets43.1 +/- 25.5bp
Average Position of motif in Background50.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGAGCTGTCC----------
GGAGCTGTCCATGGTGCTGA
 C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGTCC-----
NNNCAGCTGTCAATATN
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAGCTGTCC-----------
GGCGCTGTCCATGGTGCTGAA
 C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGAGCTGTCC----
AACGAGCTGTCAATAC
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGAGCTGTCC----
AAGCACCTGTCAATAT
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGTCC
NNGCAGCTGTT-
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAGCTGTCC----
AAAGACCTGTCAATCC
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAGCTGTCC----
AACTAGCTGTCAATAC
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTGTCC
NNGCAGCTGTC-
 A C G T A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTGTCC
CGGAGC-----
 A C G T C T A G A C T G T G C A A C T G A G T C C G A T C T A G C G A T A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T