Information for 7-TGAGGAKTAC (Motif 14)

G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C
Reverse Opposite:
A C T G A C G T C G T A T G A C A C G T A G T C A G T C A G C T A G T C C G T A
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.841
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif38.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.3 +/- 31.6bp
Average Position of motif in Background55.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGAGGAKTAC---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGAGGAKTAC-
-VRGGATTARN
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGAGGAKTAC-----
AGAGGGGATTAATTTAT
 A C G T A C G T G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGAGGAKTAC
--NGGATTAA
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGAGGAKTAC-
-GNGGATTAGN
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGAGGAKTAC
AAGAGGATTAG
 A C G T G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGAGGAKTAC
--GGGATTAA
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGAGGAKTAC-
-NNGGATTAGN
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TGAGGAKTAC-
--GGGATTANN
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TGAGGAKTAC
--RGGATTAR
 G C A T A C T G C T G A A C T G A C T G C G T A A C T G A C G T G T C A G T A C
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G