Information for 11-TCAGCAAAGCCCC (Motif 13)

C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
Reverse Opposite:
A C T G A T C G A C T G A T C G A G T C A G C T C G A T A G C T A C T G G T A C C A G T C T A G G C T A
p-value:1e-12
log p-value:-2.812e+01
Information Content per bp:1.817
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.9 +/- 28.9bp
Average Position of motif in Background53.7 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:TCAGCAAAGCCCC---
------AAGACCCYYN
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCAGCAAAGCCCC
---GGAAATCCCC
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCAGCAAAGCCCC
---GGAAANCCCC
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCAGCAAAGCCCC--
GNNAGCTAATCCCCCN
 A C G T C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCAGCAAAGCCCC
---GGAAATTCCC
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGCAAAGCCCC
ACATCAAAGG---
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGCAAAGCCCC
ACATCAAAGGNA-
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCAGCAAAGCCCC-
--GGGAAATCCCCN
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCAGCAAAGCCCC----
TAAGCCACGCCCCCTTT
 C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCAGCAAAGCCCC-
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C A G T A G T C G T C A C A T G A G T C T C G A C G T A C T G A A C T G A T G C A G T C A T G C A G T C A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T