Information for 4-GTGCTGCCCWCTAGAG (Motif 3)

T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
Reverse Opposite:
G T A C C G A T G A T C A C G T C T G A A C T G C G T A A C T G C T A G A T C G A G T C C G T A A C T G A G T C G T C A A T G C
p-value:1e-19
log p-value:-4.434e+01
Information Content per bp:1.772
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.1 +/- 12.8bp
Average Position of motif in Background46.8 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGCTGCCCWCTAGAG----
ANAGTGCCACCTGGTGGCCA
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTGCTGCCCWCTAGAG
---CTGCCCGCA----
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGCTGCCCWCTAGAG
-NGCTN----------
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGCTGCCCWCTAGAG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTGCTGCCCWCTAGAG
---ATGCCCACC----
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGCTGCCCWCTAGAG----
-TAGCGCCCCCTGGTGGCCA
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGCTGCCCWCTAGAG
AATTTGCTGAC--------
 A C G T A C G T A C G T T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTGCTGCCCWCTAGAG
----TGACCYCT----
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTGCTGCCCWCTAGAG
TGGCAGNCTGCCAG--
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTGCTGCCCWCTAGAG
--GCTGTG--------
 T A C G A C G T A C T G A G T C A C G T A C T G A T G C A G T C G T A C C G A T A G T C G A C T C G T A C T A G C G T A A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T