Information for 7-CGGCTCAGCG (Motif 10)

A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
Reverse Opposite:
A G T C A C T G A T G C A C G T A C T G C G T A A C T G A G T C A G T C A C T G
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.961
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.2 +/- 14.1bp
Average Position of motif in Background60.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CGGCTCAGCG-
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCTCAGCG
NGGATTAN--
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGCTCAGCG--
--DCTCAGCAGG
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G A C G T A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGCTCAGCG
-NGCTN----
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGCTCAGCG----
---GTCAGCANNTN
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGCTCAGCG
TGAGTCAGCA
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGGCTCAGCG
--GCTCCG--
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGCTCAGCG-
ATGACTCAGCAD
 A C G T A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGCTCAGCG
TGACTCAGCA
 A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G
A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCAGCG-
AGGATGACTCAGCAC
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C C G T A A T C G A G T C A C T G A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C