Information for 4-KAWTKGGCAKGGA (Motif 9)

A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C G T A C A C G T A C T G A G T C A G T C G T A C C G T A C G T A A C G T G T C A
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.4 +/- 28.3bp
Average Position of motif in Background79.9 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA
-NNTTGGCANN--
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA
-NGTGGGCAT---
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA
--NTTGGCANN--
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:KAWTKGGCAKGGA
---TTGGCA----
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--KAWTKGGCAKGGA-
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA
-GGTTGGCAT---
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--KAWTKGGCAKGGA
NNAATTAGTCACGGT
 A C G T A C G T A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA
--CTTGGCAA---
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA--
-TTTTGGCGGGAAAA
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A A C G T A C G T
A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KAWTKGGCAKGGA---
NATNGGGNGGGGANAN
 A C G T C G T A C G A T A C G T A C T G A C T G A C T G A G T C C G T A A C T G C T A G A C T G C G T A A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G