Information for 12-TTGCTAGTTT (Motif 30)

A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A
p-value:1e-1
log p-value:-4.324e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.3 +/- 14.7bp
Average Position of motif in Background55.9 +/- 13.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGCTAGTTT-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGCTAGTTT------
-TTCTATTTTTAGNNN
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTAGTTT---
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGCTAGTTT----
--KCTATTTTTRGH
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGCTAGTTT-
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGCTAGTTT-
-TGGCAGTTGN
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCTAGTTT----
--GCTATTTTTAGC
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTAGTTT----
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGCTAGTTT
GAATGTTTGTTT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGCTAGTTT----
--GCTATTTTTGGM
 A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C