Information for 5-AGTTGTATCG (Motif 24)

C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G G T C A C G A T C G T A G T A C G T C A C G T A A G T C C G A T
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.930
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 23.4bp
Average Position of motif in Background33.7 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGTTGTATCG--
-AATGTATCAAT
 C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTATCG-----
NNNTTGGTTTCGNTNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTATCG---
AGNGTTCTAATGANN
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTATCG----
NNANTTTTATTGGNNN
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13/MA0901.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTTGTATCG-
-NTTTTATTGG
 C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTTGTATCG
CCATTGTTNY-
 A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTTGTATCG-
-ATTGCATCAK
 C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTTGTATCG--
AAAATTGTTATGAA
 A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGTTGTATCG--
GGAAAAATTGTTAGGAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTTGTATCG-
-TTTTTATTGG
 C G T A A C T G A C G T A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G