Information for 13-GARGGRAGWTKGG (Motif 23)

T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
Reverse Opposite:
A G T C G T A C G T A C G T C A G C A T A G T C G A C T A G T C A G T C A G T C A G T C C G A T A G T C
p-value:1e-7
log p-value:-1.658e+01
Information Content per bp:1.617
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif6.91%
Number of Background Sequences with motif624.1
Percentage of Background Sequences with motif1.51%
Average Position of motif in Targets36.5 +/- 27.4bp
Average Position of motif in Background50.7 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GARGGRAGWTKGG
---NGAAGC----
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GARGGRAGWTKGG--
GGGGGGGGGGGGGGA
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------GARGGRAGWTKGG
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GARGGRAGWTKGG
NNNNGGGGGAAGANGG-
 A C G T A C G T A C G T A C G T T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GARGGRAGWTKGG--
CACGGCAGTTGGTNN
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GARGGRAGWTKGG
---AACAGATGGC
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GARGGRAGWTKGG
ACAGGATGTGGT-
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GARGGRAGWTKGG
ACAGGAAGTG---
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GARGGRAGWTKGG--
NNNTGGCAGTTGGTNN
 A C G T T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GARGGRAGWTKGG
AGAGGAAGTG---
 T C A G C G T A T C A G C T A G C T A G T C A G C T G A T C A G C G T A A C G T A C T G C A T G T C A G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T