Information for 10-TGCATCCATGTTATGG (Motif 20)

A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G C T C G T A C G T A A G T C C G T A A C G T A C T G A C T G C T G A A G C T C T A G A G T C C G T A
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.920
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 20.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG
-GCNGCCATCTTG---
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG----
---NNCTTTGTTTTGNTNNN
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG
-GCCGCCATCTTG---
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG----
-----NNNTGTTGTTGTTNG
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCATCCATGTTATGG-
AATATACATGTAAAACA
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCATCCATGTTATGG-
AATATACATGTAATATA
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGCATCCATGTTATGG-
AAAATACATGTAATACT
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG--
---AACAATGNTATTGTT
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCATCCATGTTATGG---
----GTNTTGTTGTGANNT
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGCATCCATGTTATGG
-ACATTCATGACACG-
 A C G T A C T G A G T C C T G A A G C T A G T C A G T C T C G A A C G T A C T G A C G T A C G T C T G A A C G T C T A G A C T G
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T