Information for 1-GGTATGATGGCAG (Motif 2)

A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A G T C G T A C G T C A A C G T A G T C C G T A A G C T C G T A A G T C G T A C
p-value:1e-14
log p-value:-3.400e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.3 +/- 26.4bp
Average Position of motif in Background75.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGTATGATGGCAG
----TNNGGGCAG
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGTATGATGGCAG-
--CAAGATGGCGGC
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGTATGATGGCAG--
----TAATGGCGGNC
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTATGATGGCAG-
--CAAGATGGCGGC
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGTATGATGGCAG---
NGTAGGTTGGCATNNN
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGTATGATGGCAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGTATGATGGCAG
AAGATGATGTCAT
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGTATGATGGCAG-------
---NNNANTGCAGTGCNNTT
 A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGTATGATGGCAG
AGGTGTGA------
 A C G T A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGTATGATGGCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G C T A G A C G T C T G A G A C T C T A G C G T A A C G T A C T G C T A G A G T C C G T A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T