Information for 1-ATGGTGGGARTATGAT (Motif 1)

C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
Reverse Opposite:
C T G A A C G T A G T C C G T A C G A T C T G A A G T C G A C T A G T C G A T C A G T C C T G A G A T C G A T C G T C A A G C T
p-value:1e-22
log p-value:-5.080e+01
Information Content per bp:1.720
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 23.0bp
Average Position of motif in Background58.7 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATGGTGGGARTATGAT--
------GWAAYHTGABMC
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATGGTGGGARTATGAT
RGSMTBCTGGGAAAT----
 A C G T A C G T A C G T C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.52
Offset:10
Orientation:reverse strand
Alignment:ATGGTGGGARTATGAT
----------TTTAAT
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ATGGTGGGARTATGAT--
------GWAAYHTGAKMC
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATGGTGGGARTATGAT-
NNNTNGGGCGTATNNTN
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------ATGGTGGGARTATGAT
CAATGCATTGTGGGTA------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ATGGTGGGARTATGAT
GTATTGGGTGGGTAATT---
 A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:ATGGTGGGARTATGAT
--CSTGGGAAAD----
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.50
Offset:11
Orientation:reverse strand
Alignment:ATGGTGGGARTATGAT---
-----------TTGATTGN
 C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTGGGARTATGAT
NNNATTGGGGGTNTCCT
 A C G T C T G A A C G T C T A G C T A G A G C T C T A G C T A G A C T G C T G A T C A G A G C T C G T A A C G T C T A G C G T A A G C T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T