Information for 2-ACCCCCGCTGCTCTCC (Motif 4)

C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
Reverse Opposite:
A T C G A C T G C T G A A C T G T C G A A C T G A G T C C G T A A C T G A G T C A T C G A C T G A C T G A C T G A C T G C G A T
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.859
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.5 +/- 16.7bp
Average Position of motif in Background38.8 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACCCCCGCTGCTCTCC
GACCCCCCGCTGCGC---
 A C G T A C G T C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACCCCCGCTGCTCTCC
GACCCCCCGCTGTGC---
 A C G T A C G T C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCCCCGCTGCTCTCC
GACCCCCCGCTGTG----
 A C G T A C G T C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACCCCCGCTGCTCTCC
GGCCYCCTGCTGDGH---
 A C G T A C G T C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACCCCCGCTGCTCTCC
---CCTGCTGAGH---
 C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACCCCCGCTGCTCTCC
CRCCCACGCA-------
 A C G T C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACCCCCGCTGCTCTCC
-CCCCCTTGGGCCCC-
 C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACCCCCGCTGCTCTCC
TCNCCTGCTGNGNNN-
 C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACCCCCGCTGCTCTCC
CCCCCTGCTGTG----
 C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACCCCCGCTGCTCTCC
NNTCCTGCTGTGNNN-
 C G T A A G T C A G T C A G T C G T A C A T G C A C T G A G T C C G A T A C T G A G T C A C G T G T A C A G C T A G T C A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T