Information for 2-GGTGCTCCAGGCA (Motif 3)

A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C C G A T A C T G A C T G C G T A C T A G A G T C C G T A G T A C A T G C
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 25.0bp
Average Position of motif in Background59.5 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGTGCTCCAGGCA
AAGGKGRCGCAGGCA
 A C G T A C G T A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGTGCTCCAGGCA
CNGTCCTCCC----
 A C G T A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTGCTCCAGGCA
--AGCCTCAGGCA
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTGCTCCAGGCA
--CGCCTCAGGCA
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTGCTCCAGGCA
-CTGTTCCTGG--
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTGCTCCAGGCA--
ATTGCCTCAGGCAAT
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGTGCTCCAGGCA
--AGCCTCAGGCA
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTGCTCCAGGCA-
NNNCTTTCCAGGAAA
 A C G T A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTGCTCCAGGCA
---GCTCCG----
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTGCTCCAGGCA--
NTNGCCTCAGGCNNN
 A T C G A C T G A C G T A C T G A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C T G A A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T