Information for 7-AGCCCYGCAGGGC (Motif 17)

G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C
Reverse Opposite:
A C T G A T G C A G T C A G T C A G C T A T C G A G T C T C G A A C T G A C T G A T C G T A G C C G A T
p-value:1e-6
log p-value:-1.525e+01
Information Content per bp:1.770
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif291.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets46.1 +/- 24.2bp
Average Position of motif in Background51.6 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGCCCYGCAGGGC
GGCCYCCTGCTGDGH
 A C G T A C G T G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCCCYGCAGGGC-
-TGCCCNNAGGGCA
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGCCCYGCAGGGC-
-TGCCCTGAGGGCA
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCCCYGCAGGGC-
-TGCCCTNAGGGCA
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCCCYGCAGGGC-
--CACAGCAGGGGG
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCCYGCAGGGC
CACCCCCGGGGGGG
 A C G T G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGCCCYGCAGGGC
---CCTGCTGAGH
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCCYGCAGGGC--
TCNCCTGCTGNGNNN
 G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCCCYGCAGGGC
GACCCCCCGCTGTGC
 A C G T A C G T G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCCYGCAGGGC-
CCCCCCCGGGGGGGT
 A C G T G C T A A T C G A T G C A G T C A G T C A G C T A C T G A T G C T C G A A C T G A C T G A T C G T G A C A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T