Information for 1-GTTTTCCRAGGCTYTG (Motif 1)

A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
Reverse Opposite:
G T A C G T C A C T G A C T G A C A T G T A G C A G T C C A G T A G T C C T A G A C T G C T G A C G T A C T G A G T C A A T G C
p-value:1e-21
log p-value:-4.876e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.6 +/- 23.5bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
-TTTTCCA--------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
ATTTTCCATT------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
ATTTTCCATT------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
ATTTTCCATT------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTTCCRAGGCTYTG
NTTTTACGAGN-----
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
HTTTCCCASG------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
ATTTTCCATT------
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTCCRAGGCTYTG
ANATTTTACGAGNNNN--
 A C G T A C G T A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTCCRAGGCTYTG--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTTTTCCRAGGCTYTG
-ATTTCCAAGAA----
 A T C G A C G T A G C T A C G T A G C T A G T C A G T C C T A G G C T A A C T G A C T G G A T C A G C T A G C T A C G T C A T G
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T A C G T