| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-4 | -1.088e+01 | 0.0068 | 102.0 | 14.78% | 4715.5 | 9.76% | motif file (matrix) |
svg |
| 2 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -6.866e+00 | 0.1897 | 88.0 | 12.75% | 4417.2 | 9.15% | motif file (matrix) |
svg |
| 3 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.864e+00 | 0.3447 | 225.0 | 32.61% | 13405.3 | 27.75% | motif file (matrix) |
svg |
| 4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.526e+00 | 0.3624 | 80.0 | 11.59% | 4143.2 | 8.58% | motif file (matrix) |
svg |
| 5 |
| NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer | 1e-2 | -5.328e+00 | 0.3624 | 13.0 | 1.88% | 391.3 | 0.81% | motif file (matrix) |
svg |
| 6 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.316e+00 | 0.3624 | 79.0 | 11.45% | 4117.7 | 8.53% | motif file (matrix) |
svg |
| 7 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.881e+00 | 0.3945 | 40.0 | 5.80% | 1857.1 | 3.85% | motif file (matrix) |
svg |
| 8 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -4.799e+00 | 0.3945 | 123.0 | 17.83% | 6986.5 | 14.47% | motif file (matrix) |
svg |
