Information for 16-CTCTTCAAGTAATCCT (Motif 26)

A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G G T C A A C G T C G A T T C G A G T A C A C G T A C G T A C T G C G T A C G T A C T A G C G T A C T A G
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.1 +/- 17.9bp
Average Position of motif in Background53.5 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCTTCAAGTAATCCT
--TTTCCNGGAAAN--
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCTTCAAGTAATCCT----
---GNNNATTAATCCCTNCN
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTTCAAGTAATCCT
NNCTTCCNGGAAGN--
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C A C G T A C G T

STAT1/MA0137.3/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTTCAAGTAATCCT
--TTTCCAGGAAA---
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTTCAAGTAATCCT
-TTTTCCA--------
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTCTTCAAGTAATCCT----
---NNNAATTAATCCCCNCN
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCTTCAAGTAATCCT
NNNCTTTCCAGGAAA---
 A C G T A C G T A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTTCAAGTAATCCT
-ATTTCCNGGAAATN-
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A C G T C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CTCTTCAAGTAATCCT
--------ATAATCCC
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CTCTTCAAGTAATCCT-----
----NNNATTAATCCGNTTNA
 A G T C C G A T A G T C A C G T A C G T A G T C G T C A C G T A A C T G A G C T C G T A C G T A A C G T A G T C G T A C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A