p-value: | 1e-9 |
log p-value: | -2.230e+01 |
Information Content per bp: | 1.735 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.01% |
Number of Background Sequences with motif | 10.6 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 53.9 +/- 28.4bp |
Average Position of motif in Background | 52.3 +/- 30.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTGCTGGTTGGAAT TTAAGTGCTT-------- |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 2 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAGTGCTGGTTGGAAT- GAAAACTAGTTAACATC |
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NKX2-3/MA0672.1/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGTGCTGGTTGGAAT NTCAAGTGGN--------- |
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LIN54/MA0619.1/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AAGTGCTGGTTGGAAT- --------ATTTGAATT |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 5 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTGCTGGTTGGAAT TTAAGTGGN--------- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTGCTGGTTGGAAT TTAAGTGC---------- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 7 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGTGCTGGTTGGAAT TTRAGTGSYK-------- |
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PB0042.1_Mafk_1/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGTGCTGGTTGGAAT TAAAAATGCTGACTT---- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTGCTGGTTGGAAT TTAAGTGGT--------- |
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NKX2-8/MA0673.1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGTGCTGGTTGGAAT NTCAAGTGG---------- |
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