Information for 9-TYCAWCWKCAATGTCA (Motif 17)

C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T C T A G C G T A A G T C C G T A A C G T A C G T A C T G G T A C C G A T A C T G C G A T A C G T A C T G T C A G C G T A
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 27.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0014.1_Esrra_1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA-----
----TATTCAAGGTCATGCGA
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA--
-------TCAAGGTCATA
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.62
Offset:7
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA-
-------TCAAGGTCAT
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TYCAWCWKCAATGTCA-
-------TCAAGGTCAN
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrra/MA0592.2/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA-
------TTCAAGGTCAT
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA
------BTCAAGGTCA
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA--
--------CAAGGHCANV
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.60
Offset:10
Orientation:reverse strand
Alignment:TYCAWCWKCAATGTCA-
----------NTGTCAN
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA--
---AAGTTCAAGGTCAGC
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TYCAWCWKCAATGTCA
------ATCAAGGTCA
 C G A T A G T C A G T C C G T A C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A