Information for 8-GKTTWCWCATWAGTWK (Motif 16)

C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
Reverse Opposite:
G T A C C G A T C G T A A G T C A C G T C G A T C G T A A C G T A C T G C G A T A C T G C G T A C G T A C G T A G T C A A G T C
p-value:1e-11
log p-value:-2.606e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 26.4bp
Average Position of motif in Background52.8 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax6/MA0069.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKTTWCWCATWAGTWK
-TTCACGCATGAGTT-
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T

PH0092.1_Lhx2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GKTTWCWCATWAGTWK-
NNNNNCTAATTAGTTTA
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G A C G T
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GKTTWCWCATWAGTWK
GGTTAAACATTAA---
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GKTTWCWCATWAGTWK
CNTGTTTACATA-------
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GKTTWCWCATWAGTWK-
NNNCACTAATTAGTNNT
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GKTTWCWCATWAGTWK
KTTCACACCT------
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GKTTWCWCATWAGTWK
----GCTAATTAGC--
 C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GKTTWCWCATWAGTWK
TCCATGTTTACTTTG------
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKTTWCWCATWAGTWK
TGTTTACH---------
 A C G T C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GKTTWCWCATWAGTWK
NNNTTTNTAATACNG--
 A C G T C T A G A C G T A C G T A C G T C G A T A G T C C G T A G T A C C G T A A C G T C G T A C G T A A C T G C G A T C G T A A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T A C G T