Information for 1-KTYTGCATATGCATTG (Motif 1)

A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
Reverse Opposite:
G T A C G T C A C G T A C A G T A C T G A G T C G T C A A G C T C G T A A C G T C T A G A G T C C G T A T C G A T C G A T G C A
p-value:1e-14
log p-value:-3.385e+01
Information Content per bp:1.651
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif61.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets46.0 +/- 18.7bp
Average Position of motif in Background41.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
----GHATATKCAT--
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
AYATGYATATGCATR-
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:KTYTGCATATGCATTG
---TTCATTTGCATAT
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:KTYTGCATATGCATTG-
--ATGAATATTCATGAG
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G A C G T
A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
----ACATATGG----
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
------ATTTGCATAT
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
---CTCATTTGCATW-
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG
----GAATATTCAT--
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:KTYTGCATATGCATTG--
--TNTAATTTGCATANNN
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:KTYTGCATATGCATTG
------ATTTGCATAA
 A C G T A G C T A G C T G C A T A C T G A G T C C G T A C G A T T C G A A C G T T C A G G T A C G T C A C G A T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A