Information for 4-GSCASCCTGGCCT (Motif 8)

C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T
Reverse Opposite:
C G T A A C T G A T C G T G A C G T A C G T C A C A T G A C T G T A C G G A C T A C T G A T G C G A T C
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.627
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.49%
Number of Background Sequences with motif353.3
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets48.0 +/- 22.6bp
Average Position of motif in Background48.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GSCASCCTGGCCT-
GGGGCCGAGGCCTG
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GSCASCCTGGCCT
-----CTAGGCCT
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GSCASCCTGGCCT
-----CNAGGCCT
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GSCASCCTGGCCT
AGGTCACCCTGACCT
 A C G T A C G T C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GSCASCCTGGCCT-
GGTCANNGTGACCTN
 A C G T C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GSCASCCTGGCCT
---WDNCTGGGCA
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ESR1/MA0112.3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GSCASCCTGGCCT-
AAGGTCACGGTGACCTG
 A C G T A C G T A C G T C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GSCASCCTGGCCT--
-----BNTGDCCTTG
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GSCASCCTGGCCT--
GCACCCCTGGGTGCC
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GSCASCCTGGCCT-------
GGYAGCAYDTGCTDCCCNNN
 C T A G T A C G T G A C C G T A A T G C T A G C G T A C C A G T A C T G A C T G T A G C G T A C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G