Information for 3-ATTGACTATTGGTTAT (Motif 3)

C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
Reverse Opposite:
T C G A A C G T C G T A G C T A G A T C A G T C G T C A C G T A C G A T C G T A C T A G G A C T A G T C C G T A G T C A C G A T
p-value:1e-10
log p-value:-2.307e+01
Information Content per bp:1.720
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets69.3 +/- 25.3bp
Average Position of motif in Background49.7 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATTGACTATTGGTTAT
-TTGACTTTT------
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ATTGACTATTGGTTAT-
------TATTGTTTATT
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:ATTGACTATTGGTTAT
-------ATTGTTTAN
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTGACTATTGGTTAT-----
----NNNTTTGTTTACNTTNN
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ATTGACTATTGGTTAT-----
----NNNTTTGTTTACNTTNN
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATTGACTATTGGTTAT----
---GAAAATTAATTACTTTG
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATTGACTATTGGTTAT
NTTATTGATTTTTT-----
 A C G T A C G T A C G T C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATTGACTATTGGTTAT----
---GAAAATTAATTACTTCG
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:ATTGACTATTGGTTAT
--------TTGTTTAC
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ATTGACTATTGGTTAT
-----CCATTGTTC--
 C G T A A C G T C G A T A C T G C T G A A G T C C G A T C G T A A C G T A C G T T A C G C A T G C G A T C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T