Information for 7-CATCTSWGKCCMC (Motif 13)

A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G G T A C A T G C C G A T A T C G C G T A A C T G C G T A A C G T A C T G
p-value:1e-5
log p-value:-1.249e+01
Information Content per bp:1.872
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 24.4bp
Average Position of motif in Background41.3 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATCTSWGKCCMC
ACCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CATCTSWGKCCMC
CCNNACCATCTGGCCTN--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATCTSWGKCCMC
GCCATCTGTT-----
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATCTSWGKCCMC
GGTCANYTGAGGWCA-
 A C G T A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATCTSWGKCCMC
NVCAGCTGBBNN---
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CATCTSWGKCCMC
AACATCTGGA-----
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATCTSWGKCCMC
CAGCTGTTTCCT-
 A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATCTSWGKCCMC
-CNGTCACGCCAC
 A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
A C G T G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CATCTSWGKCCMC
CCATATGT------
 A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CATCTSWGKCCMC
TGCAGCTGTCCCT--
 A C G T A C G T A G T C C G T A A C G T A G T C A C G T A T G C C G T A A T C G A C T G A G T C A G T C G T C A A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T